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Buecher, Emmanuelle; Gibbons, Mark J. (NISC (Pty) Ltd and Taylor& Francis, 2003)[more][less]
Abstract: Diel vertical migration (DVM) of six common species of hydromedusae was investigated during two drogue studies conducted in St Helena Bay on the west coast of South Africa in February 1995. Clytia spp., Obelia spp. and Bougainvillia macloviana, were largely confined to surface waters and did not appear to display any DVM. By contrast, Leuckartiara octona and Euphysa aurata displayed clear DVM and, like Proboscidactyla menoni, were found at greater depths than the other species. The depth distribution and amplitude of migration varied between surveys for most species, so definitive interpretations of patterns could not be made. URI: http://hdl.handle.net/10566/377 Files in this item: 1
BuecherDielVerticalMigration2003.pdf (121.3Kb) -
Gough, David H.; Bock, Zannie (Applied Linguistics Association of New Zealand, 2003)[more][less]
Abstract: This paper examines the effectiveness of linguistic analysis in developing scientific thinking skills and scientific attitudes. It reports on a project established at a South Africa university in South Africa which engaged students in the analysis of code-mixed data. Students who participated in the project showed gains in being able to analyze linguistic data using problem solving skills. While transfer of such skills to mainstream science teaching was not investigated, the study confirms the effectiveness of linguistic analysis in engaging students in the activities associated with the development of skills for science. URI: http://hdl.handle.net/10566/282 Files in this item: 1
Bock_ApplyingLinguistics2003.pdf (676.4Kb) -
Sparks, Conrad, A.J.; Gibbons, Mark J. (Taylor & Francis and NISC, 2003)[more][less]
Abstract: A total of 242 zooplankton samples from the upper 100 m of the water column was collected discontinuously from March 1997 to January 1999 off the Orange River mouth on the west coast of southern Africa. Six species of hydromedusae were recovered at generally low abundance, of which Euphysa aurata, Leuckartia octona and Proboscidactyla menoni were dominant. E. aurata and L. octona showed evidence of seasonality in abundance. The low diversity of the fauna was remarkable and it is hypothesized that this might be attributable in part to sedimentation from the Orange River, and in part to locally weak circulation and the wide extent of the continental shelf. URI: http://hdl.handle.net/10566/380 Files in this item: 1
SparksHydromedusaeOrangeRiver2003.pdf (57.50Kb) -
Gibbons, Mark J.; Buecher, Emmanuelle; Thibault-Botha, Delphine (NISC (Pty) Ltd and Taylor& Francis, 2003)[more][less]
Abstract: The vertical distribution, abundance and size composition of a population of Pleurobrachia pileus was studied during a six-day drogue study conducted off the west coast of South Africa in February 1995. The population was centred in deep water, possibly because of the presence of a potential predator, Beroe sp., at shallower depths. The population of P. pileus failed to display clear patterns of migration, although nocturnal recruitment from deeper water resulted in a deepening of the depth of occupation then. The population was dominated by individuals <4 mm polar diameter, and large animals were confined to the upper water layers. These results are discussed with reference to possible spawning activities. Using published equations relating size to clearance rates, it was estimated that the population could remove up to 27% of integrated mesozooplankton standing stocks, and in excess of 100% (293%) at some depths. URI: http://hdl.handle.net/10566/373 Files in this item: 1
GibbonsPleurobrachia2003.pdf (270.1Kb) -
Baker, Gillian; Smith, J.J.; Cowan, Donald A. (Elsevier, 2003)[more][less]
Abstract: The Polymerase Chain Reaction (PCR) has facilitated the detection of unculturable microorganisms in virtually any environmental source and has thus been used extensively in the assessment of environmental microbial diversity. This technique relies on the assumption that the gene sequences present in the environment are complementary to the “universal” primers used in their amplification. The recent discovery of new taxa with 16S rDNA sequences not complementary to standard universal primers suggests that current 16S rDNA libraries are not representative of true prokaryotic biodiversity. Here we re-assess the specificity of commonly used 16S rRNA gene primers and present these data in tabular form designed as a tool to aid simple analysis, selection and implementation. In addition, we present two new primer pairs specifically designed for effective ‘universal’ Archaeal 16S rDNA sequence amplification. These primers are found to amplify sequences from Crenarchaeote and Euryarchaeote type strains and environmental DNA. URI: http://hdl.handle.net/10566/169 Files in this item: 1
BakerReviewReanalysis2003.pdf (969.0Kb) -
Ah Tow, Lemese; Cowan, Donald A. (Society for General Microbiology, 2003)[more][less]
Abstract: Our results allow us to conclude that there appears to be significant conservation between the tuf genes of Planococcus, Planomicrobium and Staphylococcus spp., and that although the primer set TstaG422/TStag765 has been shown to possess high specificity, its use for the definitive identification of Staphylococcus spp. must be treated with some caution. Description: Published as a "Microbiology Comment": this provides a platform for readers of Microbiology to communicate their personal observations and opinions in a more informal way than through the submission of papers. URI: http://hdl.handle.net/10566/143 Files in this item: 1
AhTow&Cowan2003.PDF (251.5Kb) -
Sjoling, Sara; Cowan, Donald A. (Springer Verlag, 2003)[more][less]
Abstract: The microbial diversity in maritime meltwater pond sediments from Bratina Island, Ross Sea, Antarctica was investigated by 16S rDNA-dependent molecular phylogeny. Investigations of the vertical distribution, phylogenetic composition, and spatial variability of Bacteria and Archaea in the sediment were carried out. Results revealed the presence of a highly diverse bacterial population and a significantly depthrelated composition. Assessment of 173 partial 16S rDNA clones analyzed by amplified rDNA restriction analysis (ARDRA) using tetrameric restriction enzymes (HinP1I 5'GVCGC3'and Msp I. 5'CVGG3', BioLabs) revealed 153 different bacterial OTUs (operational taxonomic units). However, only seven archaeal OTUs were detected, indicating low archaeal diversity. Based on ARDRA results, 30 bacterial clones were selected for sequencing and the sequenced clones fell into seven major lineages of the domain Bacteria; the a, c, and d subdivisions of Proteobacteria, the Cytophaga–Flavobacterium– Bacteroides, the Spirochaetaceae, and the Actinobacteria. All of the archaeal clones sequenced belonged to the group Crenarchaeota and phylogenetic analysis revealed close relationships with members of the deep-branching Group 1 Marine Archaea. URI: http://hdl.handle.net/10566/148 Files in this item: 1
Sjoling16SrDNA.pdf (543.4Kb) -
Baker, Gillian; Ah Tow, Lemese; Cowan, Donald A. (Elsevier, 2003)[more][less]
Abstract: PCR-based technologies are widely employed for the detection of specific microorganisms, and may be applied to the identification of non-indigenous microorganisms in ‘pristine’ environments. For ‘pristine’ environments such as those found on the Antarctic continent, the application of these methods to the assessment of environmental contamination from human activities must be treated with caution. Issues such as the possibility of non-human dispersal of organisms, stability and survival of non-indigenous organisms in vivo, the sensitivity, reproducibility and specificity of the PCR process (and particularly primer design) and the sampling regime employed must all be considered in detail. We conclude that despite these limitations, PCR and related technologies offer enormous scope for assessment of both natural and non-indigenous microbial distributions. URI: http://hdl.handle.net/10566/149 Files in this item: 1
BakerPCRdetection2003.pdf (391.8Kb) -
McMillan, Wendy (School of Education, University of KwaZulu-Natal, 2003)[more][less]
Abstract: Drawing on a qualitative study of a cohort of final year preprimary teacher college students, this paper motivates for narrative analysis as a suitable tool for accessing ‘insider accounts’ of social reality. Through an analysis of the voices of these young people, I make the argument that narrative analysis allows us to develop an explanation of how people interpret their social locations and personal histories through the discourses and material contexts to which they have access. I commence by presenting the narrative of academic performance of one of the social groupings within the cohort. The material and discursive parameters that framed their narrative account are outlined. Similarities and differences between individual accounts are highlighted, and explanations for these similarities and differences posited. The ways in which multiple social locations nuance identity as nested are explicated. The paper concludes with a discussion of the potential contribution of narrative analysis as a conceptual tool for understanding social identity. URI: http://hdl.handle.net/10566/55 Files in this item: 1
McMillan_narrative(2003).pdf (215.0Kb) -
Chetty, Marshini; Tucker, William D.; Blake, Edwin H. (Telkom, 2004)[more][less]
Abstract: Rural areas in South Africa have unique conditions such as remoteness and scarcity of reliable public facilities. Information and Communication Technologies (ICTs) introduced into these areas must be suitable for these conditions. Using a user-centred design approach based on Participatory Design and Action Research, we have developed a telemedicine application for a rural village in the Eastern Cape. This paper describes how we determined the requirements and design for the application and why we chose Voice over Internet Protocol (VoIP) combined with a store and forward approach to achieve our telemedicine goals. We present an overview of the methodology we are using, describe the software application we have developed and mention several challenges we have faced to date. Finally we conclude that VoIP and store and forward technologies are appropriate to the South African rural situation. URI: http://hdl.handle.net/10566/621 Files in this item: 1
ChettyTuckerBlake-SATNAC2004.pdf (287.0Kb) -
Blake, Edwin H.; Tucker, William D. (CTIT, 2004)[more][less]
Abstract: Connecting people across the Digital Divide is as much a social effort as a technological one. We are developing a community-centered approach to learn how interaction techniques can compensate for poor communication across the Digital Divide. We have incorporated the lessons learnt regarding Social Intelligence Design in an (abstract) device called the SoftBridge. The device allows information to flow from endpoints through adapters (getting converted if necessary), and out to destination endpoints. Field trials are underway with two communities in South Africa, disadvantaged deaf users and an isolated rural community. First lessons learned show that we have to design user interfaces that allow users to understand and cope with delay (latency) as a necessary consequence of our approach. URI: http://hdl.handle.net/10566/617 Files in this item: 1
BlakeTucker-SID2004.pdf (158.2Kb) -
Witbooi, Sally (University of Free State, 2004)[more][less]
Abstract: The South African government and proffessions are taking stock of the transforamtion of the last decade. Manucipalities still face serious problems such as urbun populattion growth, poverty, housing shortages environmental and health problems. URI: http://hdl.handle.net/10566/609 Files in this item: 1
WitbooiInformationLandscape2004.pdf (6.625Mb) -
Glaser, Meryl; Tucker, William D. (2004)[more][less]
Abstract: This paper presents a description of telecommunications for Deaf people in South Africa by contrasting the situation in the developed world. We explain the main motivations for providing a locally appropriate solution. Research activity began with a community-based field trial of TTYs. The recommendations of the trial motivated an innovative approach to provide synchronous and accessible relay services. Drawing from international technological developments, we designed a software solution called the SoftBridge. We employ iterative Action Research cycles to drive technological modifications to the SoftBridge and to encourage adoption by the end-user community. URI: http://hdl.handle.net/10566/593 Files in this item: 1
GlaserTucker-CVHI2004.pdf (162.9Kb) -
Sun, Tao; Tucker, William D. (Telkom, 2004)[more][less]
Abstract: We have built a SoftBridge prototype within a JAIN (Java APIs for the Integrated Network) SLEE (Service Logic Execution Environment). A SoftBridge is a semi-synchronous multimodal IP (Internet Protocol) -based communication system and the first prototype has been built for deaf telephony. This research addresses service life-cycle management for a SoftBridge with carrier grade reliability. An approach is proposed that carrier grade reliability support for a SoftBridge is provided by moving it into a JAIN SLEE. A JAIN SLEE is a general application server, which provides execution and management environment for telecommunication services. An empirical evaluation methodology is adopted to verify that JAIN SLEE enables carrier grade support for a SoftBridge. This work includes the development of functions of a SoftBridge and life-cycle management of a SoftBridge within a JAIN SLEE. Current work is busy in developing multimodal media adaptation functions of the SoftBridge prototype. System test, experiments with PBX (Private Branch Exchange)/PSTN (Public Switched Telephone Network) and evaluation of the SoftBridge prototype will be carried out in the next steps. Carrier grade reliability enables a SoftBridge to access the PSTN. A highly reliable SoftBridge could bring more new value-added services for telecom providers. Using a SoftBridge as an example, we also can learn how to go about carrier grade enhancement for IP-based communication applications in the telecoms domain. URI: http://hdl.handle.net/10566/592 Files in this item: 1
SunTucker-SATNAC2004.pdf (66.62Kb) -
Tucker, William D. (ACM, 2004)[more][less]
Abstract: Connecting people across the Digital Divide is as much a social effort as a technological one. We are developing a community-centered approach to learn how interaction techniques can compensate for poor communication across the Digital Divide. Preliminary trials have yielded interfaces that deal with poor quality by adapting Instant Messaging techniques for multiple modalities, providing improved semi-synchronous communication. Lessons learned suggest new ways to design user interfaces specifically for the developing world. URI: http://hdl.handle.net/10566/591 Files in this item: 1
Tucker-CHI2004.pdf (81.56Kb) -
Adesemowo, A. Kayode; Tucker, William D. (Telkom, 2004)[more][less]
Abstract: A text only Instant Messaging (IM) built on the IETF open standard SIP/SIMPLE has been developed in line with our proposed introduction of a user-defined text Hotkey feature. These act as an on-click Affective Gesture (AG): in similitude to Face-to-Face (F2F) expressive gesture-like abilities. Given that text communication possesses expressive discourse with some presence level, we seek to show that one-click text-gesture fast-tracking enhances text communication further. For this study, we are taking a hybrid quantitative and qualitative approach. Initial Pre-trial results have shown that an AG approach is more likely to improve IM chat spontaneity/response rate. Further experimental trials are being undertaken. Mobile devices and networks are becoming more data-centric (evident in Japanese I-mode) even as mobile network voice Average Revenue Per User (ARPU) are declining, new stream of data services are required which must take cognisance of handhelds features albeit their small screen estate and input/output limitation. Given that IM is entrenched in the social space, especially among teenagers and gaining wide adoption in the business place, we believe extensions are required for IM steep uptake in the mobile world, much as SMS has gained prominence. Enhanced input mechanisms for handheld IM system are expected to increase co-presence between handheld users and their desktop-based counterparts while in a synchronous discussion. URI: http://hdl.handle.net/10566/548 Files in this item: 1
AdesemowoTuckerInstantMessaging2004.pdf (165.2Kb) -
Chetty, Marshini; Tucker, William D.; Blake, Edwin H. (SAICSIT, in assocation with ACM, 2004)[more][less]
Abstract: The digital divide between rural and urban areas within developing countries is vast. We investigate how to address this divide by introducing Information and Communication Technologies (ICTs) into remote rural areas. Our aim is to discover how to create locally relevant software applications with appropriate content for these areas. We use a user centred design approach and a modified software development lifecycle that is participatory, iterative and cyclical. This process is based on principles from Participatory Design and Action Research. This paper presents our initial experience of developing a telemedicine application for a rural village in the Eastern Cape Province of South Africa using this process. We present an overview of the methodology, describe the software application we have developed and cite several challenges we have faced. Finally we conclude that an inter-organisational and inter-disciplinary approach is needed to develop software for remote areas. URI: http://hdl.handle.net/10566/532 Files in this item: 1
ChettyTuckerBlakeICT2004.pdf (386.9Kb) -
Tucker, William D.; Blake, Edwin H.; Marsden, Gary (Telkom, 2004)[more][less]
Abstract: We looked for and found two situations within the South African Digital Divide where constant and severe macro-scale latencies would most likely interfere with the usage of Information and Communication Technology (ICT) solutions. We describe how these systems tend to exhibit both social and technical macro-scale delays. Our experience building bridges for these communities has inspired several innovations with respect to the design, development and measurement of IP communications systems. The main contribution is the Open User Interconnect (OUI) stack, a communications system model that explicitly includes the user in relation to the underlying network. The OUI stack is orthogonal to the Open System Interconnect stack. There are two outcomes from including the user in the model. First, the OUI approach necessitates the adoption of usercentred methods such as Participatory Design and in the case of the South African Digital Divide, the adoption of Action Research principles. The second outcome is a user-centred measurement notion, called Quality of Communication (QoC), that is a macro-scale spin on Quality of Service. QoC explicitly includes the measurement of user behaviour in addition to system metrics. In conclusion, we suggest that these Digital Divide-inspired contributions may be applicable to IP communications system design, development and measurement in general. The paper concludes with a brief dissertation completion plan. URI: http://hdl.handle.net/10566/485 Files in this item: 1
TuckerDigitalDivide2004.pdf (131.4Kb) -
Julius, Elroy P.; Tucker, William D. (Telkom, 2004)[more][less]
Abstract: This research aims to find an empirical solution for guaranteeing the delivery of synchronous and asynchronous messages within a semi-synchronous IP-based communication domain. The communication infrastructure that is needed between the Deaf and hearing communities forms the application domain within which the research is situated. SoftBridging is a framework for multi-modal bridging as well as multiuser, multi-modal conversation sessions. An implementation of this concept called SoftBridge, is a communication platform that allows a hearing and Deaf person to communicate inside a single uniform space. The system is based on an asynchronous transport mechanism that makes use of various web services to do the actual data conversions such as voice to text and text to voice. Publish-subscribe systems are an emerging paradigm for building a range of distributed applications. The architecture of publish-subscribe systems make use of Message Oriented Middleware (MOM) to guarantee reliable delivery of messages within a communication domain. We will choose one of these systems and incorporate it within the overall architecture of a SoftBridge system. We will modify the existing architecture of a SoftBridge system to reliably transport synchronous as well as asynchronous data over a synchronous established session. We will use the Session Initiation Protocol (SIP) to establish a synchronous session between various users and a SoftBridge system. The system will then be used as a basis for developing a Deaf telephony application that guarantees the delivery of messages no matter the synchrony. URI: http://hdl.handle.net/10566/463 Files in this item: 1
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Glaser, Meryl; Tucker, William D.; Mashao, Daniel (Telkom, 2004)[more][less]
Abstract: Following on the development of several prototypes, we have built a semi-automated Deaf Telephony prototype on the SoftBridge platform. This prototype relays text and speech between Deaf users on the Internet and hearing users on the telephone system. Previous work with a pilot trial in the laboratory revealed several opportunities for enhancement. We added a Wizard of Oz (WoOz) to replace the poorly performing automatic speech recognition functionality as well as H.323 breakout, more extensive logging and advanced call initiation functionality. In order to trial the current prototype, we initiated an Information and Communication Technology (ICT) training programme with the Deaf Community of Cape Town. Twenty Deaf users participated in the training. In addition to the training, much baseline user data was collected to give an indication of how Deaf users communicate with hearing users as well as how familiar they are with ICT devices and services. The work for the rest of this year requires us to recruit and train a WoOz operator. Subsequent trials will essentially consist of monthly cycles of prototype introduction, training, automated metric and log collection, user feedback and then feature enhancement. Linguistic analyses of the text output of the Deaf users will be analyzed. We hope to refine the SoftBridge prototype to fit the needs of the Deaf and hearing users, from both technical and social viewpoints. We expect that these iterative cycles will continue for some time and will teach us many lessons regarding multi-modal semi-synchronous IP-based communications systems. URI: http://hdl.handle.net/10566/447 Files in this item: 1
GlaserTuckerMashaoDeafTelephony2004.pdf (133.0Kb)